Read options from config file and more

Read options from standardized configuration file but still prioritize command line options.  Added several more commands:

--get-app - list provisioned applications, can be filtered by additionally specifying any of --user,--host,--service,--alias

--delete-client - delete a provisioned client

--delete-app - delete a provisioned application, works the same way as --get-app so calling just --delete-app would request to delete all applications (confirmation is always requested first)

Modified --add-client to accept arguments directly. Multiple aliases can be specified for bulk provisioning (--delete-client works the same way). Change --get-client so that no additional options lists all clients.  Do not show TOTP secret by default and require --show-secret to do so.

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